
The Immune System for Middle School Science
May 8
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Every day, your body is exposed to germs like bacteria and viruses that could make you sick. Luckily, your body has a powerful defense system working around the clock to protect you—it's called the immune system. This system is made up of special cells, tissues, and organs that work together to find and fight off invaders.

You can check out the pages of my body system unit from Teachers Pay Teachers below. You can also continue on to read more about the respiratory system.
The Immune System
The immune system is one of the most complex and important systems in your body. It includes different kinds of cells, tissues, organs, and even proteins that all work together like a team. Some parts of the immune system act as the first line of defense, like your skin, tears, and mucus. These help block invaders before they can get in. If germs do sneak past, other parts of the immune system recognize the intruders and launch an attack. Special white blood cells can find, fight, and destroy harmful organisms. Even more amazing, your immune system can “remember” many germs it has fought before, making it faster and stronger the next time they appear.
Understanding how the immune system works helps you learn how the body defends itself, why vaccines are important, and how things like sleep, nutrition, and hygiene can keep your immune system strong. In this chapter, you’ll explore the parts of the immune system, how it protects you from disease, and what happens when it doesn’t work the way it should.
Functions of the Immune System
The immune system has one main job: to protect your body from harmful invaders that can make you sick. These invaders include bacteria, viruses, fungi, and parasites. The immune system works like a powerful security team, performing several key functions to keep you healthy:
Blocking Invaders from Entering
The first job of the immune system is to keep germs out in the first place. Your skin acts like a physical barrier, and your mucus, tears, and stomach acid trap or destroy many invaders before they can get inside your body.
Recognizing Invaders
If germs do make it past the first defenses, the immune system can tell the difference between your own cells and foreign invaders. It constantly scans for anything unfamiliar, such as viruses or bacteria.
Responding to Threats
Once an invader is found, the immune system reacts quickly by sending white blood cells and chemical signals to attack. This response can cause symptoms like fever, swelling, or fatigue, which are signs that your body is working hard to fight the infection.
Destroying Harmful Substances
Some immune cells surround and eat the invading germs, while others release powerful chemicals to destroy them. This helps stop the spread of infection and protects healthy cells.
Remembering Past Infections
After defeating an infection, the immune system can “remember” how to fight it off in the future. This memory helps your body react faster if the same germ comes back. Vaccines work by giving your immune system practice in recognizing certain diseases.
Monitoring the Body
The immune system also keeps watch over your own cells, checking for damage or signs of disease. It can detect and destroy cells that are not working properly, including some that could become cancerous.
Together, these functions form your body’s defense system, helping you stay strong and healthy. Without your immune system, your body would be open to attack from all kinds of infections and illnesses.
Parts of the Immune System
The immune system is made up of many different organs, cells, and chemicals that work together to protect the body. Each part has a specific role in defending against invaders like bacteria and viruses. Here are the main parts of the immune system:
Skin and Mucous Membranes
These are the first line of defense. The skin blocks most germs from entering the body, while mucous membranes (found in the nose, mouth, and lungs) trap germs and help remove them through sneezing, coughing, or mucus.
White Blood Cells (Leukocytes)
White blood cells are the immune system’s soldiers. They travel in your blood and tissues looking for invaders. There are different types, including:
Macrophages – These "big eaters" swallow and digest germs.
Neutrophils – Fast responders that attack invaders right away.
Lymphocytes – These include B cells and T cells, which help recognize specific germs and remember them for the future.

Lymphatic System
This is a network of vessels and organs that moves a clear fluid called lymph, which carries white blood cells. It includes:
Lymph nodes – Small filters that trap germs and activate immune cells.
Spleen – Stores white blood cells and removes old or damaged red blood cells.
Thymus – Where T cells mature and learn to recognize foreign invaders.
Bone Marrow
Found inside bones, bone marrow produces new blood cells, including white blood cells. It’s where all immune cells begin their life.
Antibodies
Antibodies are proteins made by B cells that stick to specific germs and mark them for destruction. They’re part of your body’s memory system and help you fight infections faster if they return.
Complement System
This is a group of special proteins in the blood that help destroy bacteria and clear out damaged cells. It works together with antibodies and other immune responses.
Feature | Complement System | White Blood Cells |
What it is | A group of proteins found in the blood and other fluids | Living immune cells made in bone marrow |
Structure | Tiny proteins (not cells) | Complete cells with a nucleus and other parts |
Main Role | Helps the immune system by tagging, destroying, or attracting help to fight germs | Directly attacks germs, eats them, or helps create antibodies |
Action | Works like a support team—marking invaders, making holes in bacteria, and calling white blood cells | Acts as the front-line fighters—patrolling the body, recognizing invaders, and attacking them |
Examples | Complement proteins like C3, C5 | Types include macrophages, neutrophils, B cells, and T cells |
Speed | Acts quickly, often right after infection begins | Some act quickly (like neutrophils), others take time to respond (like B cells making antibodies) |
Each of these parts has a unique job, but they all work together like a team. When something harmful enters the body, these parts communicate and respond quickly to keep you safe.
How White Blood Cells Travel: Through Blood Vessels and Lymphatic Vessels

White blood cells are part of your immune system, and their job is to fight off infections. These cells are constantly moving around your body to find and destroy germs like bacteria or viruses. They travel through both the blood vessels and the lymphatic vessels, but in different ways. Let’s look at how:
1. Travel Through Blood Vessels
Blood vessels are like highways that carry blood (which is mostly made of water, oxygen, and nutrients) to different parts of your body.
White blood cells travel inside the blood to different places, like organs, tissues, or areas of infection.
When an infection happens, white blood cells rush to the infected area to help fight the germs. They can move through tiny blood vessels called capillaries, which are so small that they can squeeze through the walls to get to where they’re needed.
2. Travel Through Lymphatic Vessels
Lymphatic vessels are like a separate set of tubes that run through your body. Instead of carrying blood, they carry a fluid called lymph, which contains white blood cells and other waste.
White blood cells can leave the blood and enter the lymphatic system to keep searching for germs. Lymphatic vessels are spread throughout your body, and they help get rid of waste and fight infections.
Inside the lymph nodes (tiny organs in the lymphatic system), white blood cells "check" the fluid for germs. If they find any, they help fight them.
How Both Systems Work Together
Blood vessels bring white blood cells to the general area of infection or injury.
Once there, lymphatic vessels help carry white blood cells through the tissues to areas where germs might be hiding.
The white blood cells in the lymphatic vessels then return to the bloodstream to continue their job of defending your body.
Your body needs a steady supply of oxygen to make energy, and it must get rid of carbon dioxide, which is a waste gas. This gas exchange happens in the lungs and at the cells in your body. The process that makes this exchange possible is called diffusion.
Why You Should Wash Your Hands
Washing your hands is one of the easiest and most important things you can do to stay healthy and prevent the spread of germs. Here’s why it matters:

Germs Are Everywhere
Germs, like bacteria, viruses, and fungi, are tiny living things that can make you sick. They're all around you, on door handles, phones, money, and even on things that look clean, like food. Touching these surfaces transfers germs to your hands, and when you touch your face, mouth, or eyes, you can get sick.
Prevent the Spread of Disease
When you wash your hands, you remove the germs that can cause diseases like the flu, cold, or even serious infections like COVID-19. Washing your hands helps stop the germs from spreading to other people, especially in places like schools or at home.
It Protects Your Immune System
Washing your hands helps keep your body’s immune system strong. By washing off harmful germs before they can enter your body, you give your immune system a break from constantly fighting off infections. This means you’ll get sick less often.
How Washing Your Hands Works
Washing your hands with soap and water removes germs by:
Lathering the soap to lift dirt and germs from your skin.
Rinsing off the germs, leaving your hands clean.
When to Wash Your Hands
Make sure to wash your hands at these key times:
Before eating or touching food.
After using the bathroom.
After coughing, sneezing, or blowing your nose.
After touching things with germs (like public doorknobs, shopping carts, or petting animals).
How Vaccines Work
A vaccine is a special medicine that teaches your body how to fight certain infections without actually making you sick. It contains weakened or inactive parts of a virus or bacteria (called antigens) that help your immune system prepare for the real infection.

How Vaccines Prepare Your Immune System
Introduction of the Antigen: When you get a vaccine, your body is exposed to the antigen (a small, harmless part of the germ). This could be:
A piece of a virus or bacteria.
A weakened or dead version of the germ.
Immune Response: Your immune system recognizes this antigen as something that doesn’t belong and starts working to destroy it. White blood cells, including B cells, make antibodies, which are special proteins that can attach to the germs and destroy them.
Memory Cells: After the immune system fights off the antigen, it keeps a memory of the germ. Memory cells (like memory B cells and T cells) remember how to recognize and fight the germ in case you are exposed to it again in the future.
What Happens After Vaccination?
If you are ever exposed to the real version of the virus or bacteria, your immune system reacts faster and stronger because it remembers how to fight it. This helps you avoid getting sick or you get less sick than you would have without the vaccine.
Why We Get Fevers
A fever is a rise in body temperature that occurs when the body is fighting an infection. It is triggered by the immune system releasing chemicals called pyrogens, which affect the hypothalamus, the part of the brain that regulates body temperature. The hypothalamus raises the body’s temperature, causing a fever. The primary reason for a fever is that many harmful germs, such as bacteria and viruses, thrive within a specific temperature range. By increasing the body temperature, the immune system creates an environment that is less favorable for these pathogens, slowing their growth and spread.
Additionally, a fever helps to boost the activity of white blood cells, which are key to fighting off infections. The elevated body temperature also enhances the inflammatory response, increasing blood flow to affected areas, which allows immune cells and antibodies to reach the infection site more efficiently. While fevers can make you feel uncomfortable, they serve an important role in the body’s defense by fighting infections and enhancing immune function. However, it’s important to monitor the temperature, as a high fever (above 103°F or 39.4°C) can be dangerous and may require medical attention. In general, fever is a sign that the body is working hard to recover from an illness.
Diseases of the Immune System
The immune system is responsible for protecting your body from harmful invaders like bacteria, viruses, and fungi. Sometimes, the immune system doesn’t work the way it should, and this can lead to immune system diseases. There are three main types of immune system diseases: autoimmune diseases, immune deficiency diseases, and allergic diseases. Let’s explore them.
Autoimmune Diseases
In autoimmune diseases, the immune system mistakenly attacks the body’s own healthy cells and tissues. The immune system gets confused and thinks these normal cells are invaders. Some common autoimmune diseases include:
Type 1 Diabetes: The immune system attacks and destroys the cells in the pancreas that produce insulin, a hormone that helps control blood sugar.
Rheumatoid Arthritis: The immune system attacks the joints, causing pain, swelling, and stiffness.
Multiple Sclerosis: The immune system attacks the protective covering of nerve fibers, leading to problems with movement and coordination.
In autoimmune diseases, the immune system is too overactive and ends up hurting the body instead of protecting it.
Immune Deficiency Diseases
Immune deficiency diseases happen when the immune system is too weak or doesn't work properly. This makes the body more vulnerable to infections. People with immune deficiency diseases are more likely to get sick from things that wouldn’t usually cause harm. Some examples include:
HIV/AIDS: HIV (Human Immunodeficiency Virus) attacks the immune system itself. If left untreated, it can lead to AIDS (Acquired Immunodeficiency Syndrome), where the body is no longer able to fight off many infections and diseases.
Severe Combined Immunodeficiency (SCID): This is a rare genetic disorder where babies are born without a functional immune system, making them very vulnerable to infections.
In immune deficiency diseases, the immune system is underactive, and the body can’t fight off infections like it should.
Allergic Diseases
In allergic diseases, the immune system reacts too strongly to substances that are normally harmless, like pollen, dust, or certain foods. The immune system treats these harmless things as threats, leading to allergic reactions. Some common allergic diseases are:
Asthma: The immune system reacts to things like pollen or dust, causing the airways in the lungs to tighten and making it hard to breathe.
Hay Fever: The immune system reacts to pollen, causing symptoms like sneezing, runny nose, and itchy eyes.
Food Allergies: Some people’s immune systems react to foods like peanuts or shellfish, leading to reactions that can range from mild (like hives) to severe (like difficulty breathing).
In allergic diseases, the immune system is overactive and responds to harmless substances as though they are dangerous invaders.

Immune system diseases can happen when the immune system is too strong, too weak, or wrongly focused. In autoimmune diseases, it attacks the body; in immune deficiency diseases, it can't defend the body properly; and in allergies, it reacts too strongly to harmless things. Understanding how the immune system works can help scientists find better ways to treat these diseases and keep people healthy.
How the Immune System Interacts with Other Body Systems
The immune system is one of the most important parts of your body’s defense against harmful invaders. However, it doesn’t work alone. It interacts with several other systems in your body to keep you healthy. Let’s explore how the immune system works with other systems to protect your body.
The Circulatory System and the Immune System
The circulatory system (which includes the heart and blood vessels) plays a big role in helping the immune system do its job. The blood carries white blood cells, which are the immune system’s defenders, all around the body. These white blood cells look for and fight off germs like viruses and bacteria. The circulatory system also helps transport important molecules like antibodies (proteins that fight infections) to areas that need them.
When the body gets infected, the immune system uses the blood to carry white blood cells to the infected area.
The lymphatic system, which is closely linked to the circulatory system, carries lymph fluid filled with immune cells to help fight infections.
The Lymphatic System and the Immune System
The lymphatic system is another key part of the immune system, and it works with the circulatory system to move fluid and immune cells around the body. The lymphatic system includes:
Lymph nodes (small bean-shaped structures that filter harmful substances).
Lymph vessels (which carry lymph fluid, containing white blood cells).
Spleen (which filters blood and stores white blood cells).
Lymph nodes trap and filter out harmful substances like germs, and they provide a place for immune cells to meet and attack invaders. The lymphatic system and circulatory system work together to help move these cells quickly where they are needed.
The Nervous System and the Immune System
The nervous system controls many of the body’s functions, and it can communicate with the immune system to help protect you from danger. When you’re hurt or sick, your nervous system sends signals to the immune system to respond.
Pain signals from the nervous system can alert the immune system that something is wrong, causing it to send immune cells to that area.
The brain can release chemicals that help activate the immune system, triggering an inflammatory response to fight off infection.
The Digestive System and the Immune System
The digestive system and immune system work together to protect your body from harmful germs that may enter through food or drink. The lining of your stomach and intestines is full of immune cells that help protect your body from bacteria and viruses that might come from food.
Good bacteria in the digestive system help maintain balance and support the immune system.
The gut-associated lymphoid tissue (GALT) is part of the immune system located in the digestive tract. It helps defend against harmful pathogens.
The Respiratory System and the Immune System
The respiratory system (which includes the lungs and airways) also works closely with the immune system. The immune system helps protect the respiratory system from harmful invaders like viruses, bacteria, and other germs that enter the body when you breathe in.
The mucus in the respiratory system traps germs, and cilia (tiny hair-like structures) move them out of the body.
If a harmful pathogen reaches the lungs, white blood cells will attack and try to destroy the infection.
The Integumentary System and the Immune System
Your skin is the body’s first line of defense against harmful invaders. It acts as a physical barrier to keep out germs. When the skin is damaged (like when you get a cut), the immune system quickly responds by sending white blood cells to fight infection.
The skin also has specialized cells that help identify harmful invaders and send signals to other parts of the immune system.
Antimicrobial proteins in sweat and oils on the skin help kill or prevent germs from growing on the skin’s surface.
The immune system doesn’t work alone; it relies on other systems in the body to help protect you from harm. The circulatory system moves immune cells, the digestive system helps filter harmful germs, the nervous system alerts the immune system to danger, and the skin keeps out invaders. Together, all these systems work to keep your body safe and healthy.

Flashcards on the Immune System
Flashcards are the best way to practice remembering new information. You can get digital and printable flashcards at Teachers Pay Teachers, or you can use the flashcards here for free!
The Human Body
Middle School Science
